CASita plate with 47 Cancer and apoptosis-associated alternative splice events -- RBP knockdowns

delta-PSI Representation (help) : .

PSI Representation (help) : .

Data file

Heatmap (part 1/1)

Peak Ratio Bar (help) : All ratio bars

Peak Ratio Data (help) : data sheet


Using Unexpected Peak Align
Using Peak Matching WallacePeakMatcher MedianCalibrator
Using Expected peaks based on target genes

Primer Pair List (help) : primer pair list

Name Gene Forward Reverse
VIEW AKAP13 AKAP13 AKAP13.u.f.21 AKAP13.u.r.24
VIEW AKIP1 AKIP1;C11orf17 C11orf17-F1 C11orf17-R1
VIEW APAF1 APAF1 APAF1.F8 APAF1.R8
VIEW APG5L APG5L;ATG5 APG5L.u.f.9 APG5L.u.r.5
VIEW AXIN1 AXIN1 AXIN1.u.f.11 AXIN1.R5
VIEW BCL2L1-3'ss BCL2L1 BCL2L1.u.f.5 BCL2L1.b.r.24
VIEW BCL2L12 BCL2L12 BCL2L12-3 BCL2L12-4
VIEW CHEK2 CHEK2 CHEK2.u.f.31 CHEK2.u.r.29
VIEW CLIP1 CLIP1;RSN RSN.F35 RSN.R13
VIEW DDR1 DDR1 DDR1.F8 DDR1.R9
VIEW DNMT3B-multiEx DNMT3B DNMT3B.u.f.26 DNMT3B.u.r.28
VIEW DRF1-3'ss DBF4B;DRF1 DRF1.F1 DRF1.R1
VIEW ECT2 ECT2 ECT2.F12 ECT2.R11
VIEW F3 F3 F3.F2 F3.R2
VIEW FANCA FANCA FANCA.F13 FANCA.R13
VIEW FANCL-multiEx FANCL FANCL.F9 FANCL.R5
VIEW FGFR1 FGFR1 FGFR1.F11 FGFR1.R11
VIEW FGFR1OP FGFR1OP FGFR1OP.u.f.10 FGFR1OP.u.r.12
VIEW FN1-EDA FN1 FN1.u.f.40 FN1.u.r.45
VIEW FN1-EDB FN1 FN1.u.f.30 FN1.u.r.34
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