|
gene
|
"forward name"
|
"reverse name"
|
"forward sequence"
|
"reverse sequence"
|
"amplicon length (bps)"
|
chromosome
|
strand
|
"amplified transcripts"
|
"amplicon sequence"
|
| ANKRD36 |
ANKRD36.2826386.F1 |
ANKRD36.2826386.R1 |
CCACTGTTATTTGCTGTGAGTCG |
AGATCTTCATATCTCTTTCTTTCGTATTCATAAA |
281 |
2 |
+ |
ANKRD36.cApr07 |
CCACTGTTATTTGCTGTGAGTCGAAGAAAAGTGAAAATGGTGGAATTTTTATTAAAGAAAAAAGCAAATGTAAATGCCATTGATTATCTTGGCAGATCAGCCCTCATACATGCTGTTACTCTTGGAGAAAAAGATATAGTCATTCTTCTTCTGCAGCACAATATTGATGTGCTTTCTCGAGATGCGTTTCGAAAGATTGCAGGAGATTATGCCATTGAGGCTAAGAATAGAGTCATTTTTGATCTAATTTATGAATACGAAAGAAAGAGATATGAAGATCT |
| ANKRD36 |
ANKRD36.2826386.F2 |
ANKRD36.2826386.R2 |
GCCACTGTTATTTGCTGTGAGTC |
AAGATCTTCATATCTCTTTCTTTCGTATTCATAA |
283 |
2 |
+ |
ANKRD36.cApr07 |
GCCACTGTTATTTGCTGTGAGTCGAAGAAAAGTGAAAATGGTGGAATTTTTATTAAAGAAAAAAGCAAATGTAAATGCCATTGATTATCTTGGCAGATCAGCCCTCATACATGCTGTTACTCTTGGAGAAAAAGATATAGTCATTCTTCTTCTGCAGCACAATATTGATGTGCTTTCTCGAGATGCGTTTCGAAAGATTGCAGGAGATTATGCCATTGAGGCTAAGAATAGAGTCATTTTTGATCTAATTTATGAATACGAAAGAAAGAGATATGAAGATCTT |
| ASPH |
ASPH.3137642.F1 |
ASPH.3137642.R1 |
AGAATGGGAGGAAAGGCGGAC |
ATCTCCATCACCATCAGCATCAT |
212 |
8 |
- |
"ASPH.bApr07, ASPH.dApr07, ASPH.hApr07, ASPH.kApr07, ASPH.nApr07, ASPH.oApr07, ASPH.rApr07" |
AGAATGGGAGGAAAGGCGGACTCTCAGGAACTTCATTCTTCACGTGGTTTATGGTGATTGCATTGCTGGGCGTCTGGACATCTGTAGCTGTCGTTTGGTTTGATCTTGTTGACTATGAGGAAGTTCTAGCCAAAGCAAAGGACTTCCGTTATAACTTATCAGAGGTGCTTCAAGGAAAACTAGGAATCTATGATGCTGATGGTGATGGAGAT |
| ASPH |
ASPH.3137642.F1 |
ASPH.3137642.R1 |
AGAATGGGAGGAAAGGCGGAC |
ATCTCCATCACCATCAGCATCAT |
167 |
8 |
- |
"ASPH.aApr07, ASPH.cApr07, ASPH.eApr07, ASPH.fApr07, ASPH.gApr07, ASPH.iApr07, ASPH.jApr07, ASPH.mApr07, ASPH.pApr07, ASPH.tApr07, ASPH.uApr07, ASPH.vcApr07" |
AGAATGGGAGGAAAGGCGGACTCTCAGGAACTTCATTCTTCACGTGGTTTATGGTGATTGCATTGCTGGGCGTCTGGACATCTGTAGCTGTCGTTTGGTTTGATCTTGTTGACTATGAGGAAGTTCTAGGAAAACTAGGAATCTATGATGCTGATGGTGATGGAGAT |
| ASPH |
ASPH.3137642.F2 |
ASPH.3137642.R2 |
AGCTGTCGTTTGGTTTGATCTTG |
AAAACTTTGGCATCATCCACATCA |
153 |
8 |
- |
"ASPH.bApr07, ASPH.dApr07, ASPH.hApr07, ASPH.kApr07, ASPH.nApr07, ASPH.oApr07, ASPH.rApr07" |
AGCTGTCGTTTGGTTTGATCTTGTTGACTATGAGGAAGTTCTAGCCAAAGCAAAGGACTTCCGTTATAACTTATCAGAGGTGCTTCAAGGAAAACTAGGAATCTATGATGCTGATGGTGATGGAGATTTTGATGTGGATGATGCCAAAGTTTT |
| ASPH |
ASPH.3137642.F2 |
ASPH.3137642.R2 |
AGCTGTCGTTTGGTTTGATCTTG |
AAAACTTTGGCATCATCCACATCA |
108 |
8 |
- |
"ASPH.aApr07, ASPH.cApr07, ASPH.eApr07, ASPH.fApr07, ASPH.gApr07, ASPH.iApr07, ASPH.jApr07, ASPH.mApr07, ASPH.pApr07, ASPH.tApr07, ASPH.uApr07, ASPH.vcApr07" |
AGCTGTCGTTTGGTTTGATCTTGTTGACTATGAGGAAGTTCTAGGAAAACTAGGAATCTATGATGCTGATGGTGATGGAGATTTTGATGTGGATGATGCCAAAGTTTT |
| C4orf28 |
C4orf28.2720763.F1 |
C4orf28.2720763.R1 |
CAGCTAAGTGTCGTTGTTGGTC |
TGTTGGCTCCCTTCTTCAACAG |
213 |
4 |
+ |
"C4orf28.bApr07, C4orf28.cApr07, C4orf28.eApr07, C4orf28.fApr07" |
CAGCTAAGTGTCGTTGTTGGTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCCTTTCCAAGAGATTAATGGACAAGAAATTCAAAGAGCCAATCACCAGCGCATTACAAAAGCTAGAGCAACATGGTGGAAGTGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCAACA |
| C4orf28 |
C4orf28.2720763.F1 |
C4orf28.2720763.R1 |
CAGCTAAGTGTCGTTGTTGGTC |
TGTTGGCTCCCTTCTTCAACAG |
132 |
4 |
+ |
"C4orf28.dApr07, C4orf28.gApr07, C4orf28.hApr07, C4orf28.iApr07, C4orf28.jApr07, C4orf28.mApr07, C4orf28.nApr07, C4orf28.qApr07, C4orf28.vjApr07" |
CAGCTAAGTGTCGTTGTTGGTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCAACA |
| C4orf28 |
C4orf28.2720763.F2 |
C4orf28.2720763.R2 |
GTCCTTCTCTAAACGACCATCTGA |
TTGGCTCCCTTCTTCAACAGCA |
192 |
4 |
+ |
"C4orf28.bApr07, C4orf28.cApr07, C4orf28.eApr07, C4orf28.fApr07" |
GTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCCTTTCCAAGAGATTAATGGACAAGAAATTCAAAGAGCCAATCACCAGCGCATTACAAAAGCTAGAGCAACATGGTGGAAGTGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCAA |
| C4orf28 |
C4orf28.2720763.F2 |
C4orf28.2720763.R2 |
GTCCTTCTCTAAACGACCATCTGA |
TTGGCTCCCTTCTTCAACAGCA |
111 |
4 |
+ |
"C4orf28.dApr07, C4orf28.gApr07, C4orf28.hApr07, C4orf28.iApr07, C4orf28.jApr07, C4orf28.mApr07, C4orf28.nApr07, C4orf28.qApr07, C4orf28.vjApr07" |
GTCCTTCTCTAAACGACCATCTGAAGCATCTGCTTACAAGCGGGAGCCTTAGCATCATCAAATCTAAAATTCCAACATACTGCTCCATATGCTGTTGAAGAAGGGAGCCAA |
| CASK |
CASK.4005893.F1 |
CASK.4005893.R1 |
AAGATTGTGCCAAGTTACCGCA |
AGGAGAAGGAATGAGACCTGCA |
294 |
X |
- |
CASK.gApr07 |
AAGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGAGAGATTCCCCTTCCACTTCCAGACAGTCCCCAGCTAATGGTCATAGCAGCACTAACAATTCTGTTTCGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCT |
| CASK |
CASK.4005893.F1 |
CASK.4005893.R1 |
AAGATTGTGCCAAGTTACCGCA |
AGGAGAAGGAATGAGACCTGCA |
330 |
X |
- |
"CASK.aApr07, CASK.bApr07" |
AAGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGAGAGATTCCCCTTCCACTTCCAGACAGTCCCCAGCTAATGGTCATAGCAGCACTAACAATTCTGTTTCGGACTTGCCATCAACTACCCAACCAAAAGGACGACAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCT |
| CASK |
CASK.4005893.F1 |
CASK.4005893.R1 |
AAGATTGTGCCAAGTTACCGCA |
AGGAGAAGGAATGAGACCTGCA |
225 |
X |
- |
CASK.hApr07 |
AAGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCT |
| CASK |
CASK.4005893.F1 |
CASK.4005893.R1 |
AAGATTGTGCCAAGTTACCGCA |
AGGAGAAGGAATGAGACCTGCA |
261 |
X |
- |
"CASK.cApr07, CASK.dApr07, CASK.fApr07" |
AAGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGGACTTGCCATCAACTACCCAACCAAAAGGACGACAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCT |
| CASK |
CASK.4005893.F2 |
CASK.4005893.R2 |
AGATTGTGCCAAGTTACCGCA |
CAGGAGAAGGAATGAGACCTGC |
294 |
X |
- |
CASK.gApr07 |
AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGAGAGATTCCCCTTCCACTTCCAGACAGTCCCCAGCTAATGGTCATAGCAGCACTAACAATTCTGTTTCGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTG |
| CASK |
CASK.4005893.F2 |
CASK.4005893.R2 |
AGATTGTGCCAAGTTACCGCA |
CAGGAGAAGGAATGAGACCTGC |
330 |
X |
- |
"CASK.aApr07, CASK.bApr07" |
AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGAGAGATTCCCCTTCCACTTCCAGACAGTCCCCAGCTAATGGTCATAGCAGCACTAACAATTCTGTTTCGGACTTGCCATCAACTACCCAACCAAAAGGACGACAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTG |
| CASK |
CASK.4005893.F2 |
CASK.4005893.R2 |
AGATTGTGCCAAGTTACCGCA |
CAGGAGAAGGAATGAGACCTGC |
225 |
X |
- |
CASK.hApr07 |
AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTG |
| CASK |
CASK.4005893.F2 |
CASK.4005893.R2 |
AGATTGTGCCAAGTTACCGCA |
CAGGAGAAGGAATGAGACCTGC |
261 |
X |
- |
"CASK.cApr07, CASK.dApr07, CASK.fApr07" |
AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCTGTGAGGACTTGCCATCAACTACCCAACCAAAAGGACGACAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTATTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTG |
| CHRNA5 |
CHRNA5.3603444.F1 |
CHRNA5.3603444.R1 |
GACCAGTACGAAAACAGTCATCAG |
ACAAAAAGCCCAAGAGATCCAAC |
909 |
15 |
+ |
CHRNA5.aApr07 |
GACCAGTACGAAAACAGTCATCAGGTACAATGGCACTGTCACCTGGACTCCACCGGCAAACTACAAAAGTTCCTGTACCATAGATGTCACGTTTTTCCCATTTGACCTTCAGAACTGTTCCATGAAATTTGGTTCTTGGACTTATGATGGATCACAGGTTGATATAATTCTAGAGGACCAAGATGTAGACAAGAGAGATTTTTTTGATAATGGAGAATGGGAGATTGTGAGTGCAACAGGGAGCAAAGGAAACAGAACCGACAGCTGTTGCTGGTATCCGTATGTCACTTACTCATTTGTAATCAAGCGCCTGCCTCTCTTTTATACCTTGTTCCTTATAATACCCTGTATTGGGCTCTCATTTTTAACTGTACTTGTCTTCTATCTTCCTTCAAATGAAGGTGAAAAGATTTGTCTCTGCACTTCAGTACTTGTGTCTTTGACTGTCTTCCTTCTGGTTATTGAAGAGATCATACCATCATCTTCAAAAGTCATACCTCTAATTGGAGAGTATCTGGTATTTACCATGATTTTTGTGACACTGTCAATTATGGTAACCGTCTTCGCTATCAACATTCATCATCGTTCTTCCTCAACACATAATGCCATGGCGCCTTTGGTCCGCAAGATATTTCTTCACACGCTTCCCAAACTGCTTTGCATGAGAAGTCATGTAGACAGGTACTTCACTCAGAAAGAGGAAACTGAGAGTGGTAGTGGACCAAAATCTTCTAGAAACACATTGGAAGCTGCGCTCGATTCTATTCGCTACATTACAAGACACATCATGAAGGAAAATGATGTCCGTGAGGTTGTTGAAGATTGGAAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGT |
| CHRNA5 |
CHRNA5.3603444.F1 |
CHRNA5.3603444.R1 |
GACCAGTACGAAAACAGTCATCAG |
ACAAAAAGCCCAAGAGATCCAAC |
779 |
15 |
+ |
CHRNA5.eApr07 |
GACCAGTACGAAAACAGTCATCAGGTACAATGGCACTGTCACCTGGACTCCACCGGCAAACTACAAAAGTTCCTGTACCATAGATGTCACGTTTTTCCCATTTGACCTTCAGAACTGTTCCATGAAATTTGGTTCTTGGACTTATGATGGATCACAGGTTGATATAATTCTAGAGGACCAAGATGTAGACAAGAGAGATTTTTTTGATAATGGAGAATGGGAGATTGTGAGTGCAACAGGGAGCAAAGGAAACAGAACCGACAGCTGTTGCTGGTATCCGTATGTCACTTACTCATTTGTAATCAAGCGCCTGCCTCTCTTTTATACCTTGTTCCTTATAATACCCTGTATTGGGCTCTCATTTTTAACTGTACTTGTCTTCTATCTTCCTTCAAATGAAGGTGAAAAGATTTGTCTCTGCACTTCAGTACTTGTGTCTTTGACTGTCTTCCTTCTGGTTATTGAAGAGATCATACCATCATCTTCAAAAGTCATACCTCTAATTGGAGAGTATCTGGTATTTACCATGATTTTTGTGACACTGTCAATTATGGTAACCGTCTTCGCTATCAACATTCATCATCGTTCTTCCTCAACACATAATGCCATGGCGCCTTTGGTCCGCAAGATATTTCTTCACACGCTTCCCAAACTGCTTTGCATGAGAAGTCATGTAGACAGGTTGTTGAAGATTGGAAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGT |
